automesh mesh --help
Creates a finite element mesh from a segmentation
Usage: automesh mesh <COMMAND>
Commands:
hex Creates an all-hexahedral mesh from a segmentation
tri Creates all-triangular isosurface(s) from a segmentation
help Print this message or the help of the given subcommand(s)
Options:
-h, --help Print help
automesh mesh hex --help
Creates an all-hexahedral mesh from a segmentation
Usage: automesh mesh hex [OPTIONS] --input <FILE> --output <FILE> [COMMAND]
Commands:
smooth Applies smoothing to the mesh before output
help Print this message or the help of the given subcommand(s)
Options:
-i, --input <FILE> Segmentation input file (npy | spn)
-o, --output <FILE> Mesh output file (exo | inp | mesh | vtk)
-d, --defeature <NUM> Defeature clusters with less than NUM voxels
-x, --nelx <NEL> Number of voxels in the x-direction
-y, --nely <NEL> Number of voxels in the y-direction
-z, --nelz <NEL> Number of voxels in the z-direction
-r, --remove <ID>... Voxel IDs to remove from the mesh
--xscale <SCALE> Scaling (> 0.0) in the x-direction, applied before translation [default: 1]
--yscale <SCALE> Scaling (> 0.0) in the y-direction, applied before translation [default: 1]
--zscale <SCALE> Scaling (> 0.0) in the z-direction, applied before translation [default: 1]
--xtranslate <VAL> Translation in the x-direction [default: 0]
--ytranslate <VAL> Translation in the y-direction [default: 0]
--ztranslate <VAL> Translation in the z-direction [default: 0]
--metrics <FILE> Quality metrics output file (csv | npy)
-q, --quiet Pass to quiet the terminal output
-h, --help Print help
automesh mesh tri --help
Creates all-triangular isosurface(s) from a segmentation
Usage: automesh mesh tri [OPTIONS] --input <FILE> --output <FILE> [COMMAND]
Commands:
smooth Applies smoothing to the mesh before output
help Print this message or the help of the given subcommand(s)
Options:
-i, --input <FILE> Segmentation input file (npy | spn)
-o, --output <FILE> Mesh output file (exo | inp | mesh | stl | vtk)
-d, --defeature <NUM> Defeature clusters with less than NUM voxels
-x, --nelx <NEL> Number of voxels in the x-direction
-y, --nely <NEL> Number of voxels in the y-direction
-z, --nelz <NEL> Number of voxels in the z-direction
-r, --remove <ID>... Voxel IDs to remove from the mesh
--xscale <SCALE> Scaling (> 0.0) in the x-direction, applied before translation [default: 1]
--yscale <SCALE> Scaling (> 0.0) in the y-direction, applied before translation [default: 1]
--zscale <SCALE> Scaling (> 0.0) in the z-direction, applied before translation [default: 1]
--xtranslate <VAL> Translation in the x-direction [default: 0]
--ytranslate <VAL> Translation in the y-direction [default: 0]
--ztranslate <VAL> Translation in the z-direction [default: 0]
--metrics <FILE> Quality metrics output file (csv | npy)
-q, --quiet Pass to quiet the terminal output
-h, --help Print help