Mesh

automesh mesh --help Creates a finite element mesh from a segmentation Usage: automesh mesh [OPTIONS] --input <FILE> --output <FILE> [COMMAND] Commands: smooth Applies smoothing to the mesh before output help Print this message or the help of the given subcommand(s) Options: -i, --input <FILE> Segmentation input file (npy | spn) -o, --output <FILE> Mesh output file (exo | inp | mesh | vtk) -d, --defeature <NUM> Defeature clusters with less than NUM voxels -x, --nelx <NEL> Number of voxels in the x-direction -y, --nely <NEL> Number of voxels in the y-direction -z, --nelz <NEL> Number of voxels in the z-direction -r, --remove <ID>... Voxel IDs to remove from the mesh --xscale <SCALE> Scaling (> 0.0) in the x-direction [default: 1] --yscale <SCALE> Scaling (> 0.0) in the y-direction [default: 1] --zscale <SCALE> Scaling (> 0.0) in the z-direction [default: 1] --xtranslate <VAL> Translation in the x-direction [default: 0] --ytranslate <VAL> Translation in the y-direction [default: 0] --ztranslate <VAL> Translation in the z-direction [default: 0] --metrics <FILE> Name of the quality metrics file -q, --quiet Pass to quiet the terminal output --surface Pass to mesh internal surfaces -h, --help Print help
automesh mesh smooth --help Applies smoothing to the mesh before output Usage: automesh mesh --input <FILE> --output <FILE> smooth [OPTIONS] Options: -c, --hierarchical Pass to enable hierarchical control -n, --iterations <NUM> Number of smoothing iterations [default: 20] -m, --method <NAME> Name of the smoothing method [default: Taubin] -k, --pass-band <FREQ> Pass-band frequency for Taubin smoothing [default: 0.1] -s, --scale <SCALE> Scaling parameter for smoothing [default: 0.6307] -h, --help Print help